Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891478.1_cds_XP_016446266.1_41140
CDS Infomation

[gene=LOC107771421] [db_xref=GeneID:107771421] [protein=rust resistance kinase Lr10-like isoform X2] [protein_id=XP_016446266.1] [location=complement(join(30640..31775,32374..32406,32559..33384))] [gbkey=CDS]
Sequence

ATGAAAATGTCTGGAGGAACCAAGTTTCCTTCAGTTCTTACAATCCTCATCTTCTTGCAG
CTCTCTGACACCCCATTTGCCGAACAGAACCAGCGGTGTGCACCTTCTAGTTGTGGGCAT
ATTAAGAACATCAGCTACCCCTTTCGATTGAAAACTGGTCCAAAGCACTGTGGCGACGAA
AAATATGAATTAAGCTGCCAAGGAAATCGCACCATATTCACGATATTTACAGAAAGTTTG
AATGGGTCTCTGAACTACTATGTGCAAGCCATCAATTACGATAACTCCACTATCCGCCTT
GTAGATCCTGGTATAAGAGAACAAGTTGTTTGCTCTCTTCCTCAGCATTCAATTACGTTT
TTCACTCTCCCTTTTCAATTTGATATTACTAAACCTGATGGTTCTTATGCTCCTTTAGTT
GTGCCAATCACTATTTTCAGCTGTCCATTTGCCATGAATTCTCCCGCCTTTGTAGAAATC
ACTAATTGTCTCAACAGGAGTGATGCTTCCAATACTTCTTCTGAATTATTAAAGGGACAC
ACATATGCAACCATGGCCAAATTGTTGGCATCTGATTTGAGCGTAGGGTGTACTGTAAAC
CTCATGTCAATGACTTCATGGACTATTGATGATGCAAATGTTTATATTTCAATCTTAGAG
CTGCATAATGCTTTGGCATATGGGTTTGAACTTTCATGGTTTCGTGACATTTACTGTAAC
AAGTGCGACTATTTTTATGGTTGCGAAGGTGAAAATTCTAGCGATGTTCGCTGTGTGGAT
TACTCCTGCACGGTTTACAATTTTCATTTCTTCAAAACTTCATGTGTTACTCAAAGACAT
CTTCTCAGCGTTCTTGCAAGGCTTAGCCTTTTGGCAAGAATCGTACTATTCCCATGCATA
TTTGTGTTTCTAATGATTGAATTACGAAGAAGGCATATGTCGATCTTTGATGCAATTGAA
AGTTTCCTGCATAGTAGAAACAATTTCATGCCCATTCGATACCCCTATTCCAACATAAGG
AAGATGACTAGGAATTTCAAAGAGAAACTAGGCCAAGGAGGTTATGGTTCAGTATATAAA
GGCAAACTTCAAAGTGGTCCTAATGTTGCAGTGAAGATCTTGACCAAGCCCAAAGCTGAT
GGGCAAGACTTCATCAATGAGGTTGCCACAATCGGGAGGATTCATCATGTTAACGTGGTA
CAACTTATTGGCTATTGTGCTGAGAGATCTAAACGTGCCCTCGTATATGACTTCATGCCT
AATGGATCACTTGACAAATACATCACATCCCGAGAAGGAGGAACTCTACTGAGCTGGCAA
AGAAAGTCTGAAATCGCTCTTGGAGTTGCTCGAGGTATTGAATATTTGCATCGAGGTTGT
GACATACAAATTCTACATTTTGACATCAAGCCACACAACATACTTTTGGATGAAAATTTC
GTTCCAAAAATTTCTGACTTTGGTCTGGCCAAATTATACCCAACGGATAACAGCATTGTT
ACTCTAACAGCAGCAAGGGGAACAATCGGATATGTAGCTCCAGAACTGATCAACAGAAGC
ATTGGTCCGATATCTTATAAGGCAGATGTGTATAGCTTTGGAATGTTACTGATTGAGATA
GCAGGCATGAAAGGAAACTTGGCAGCAAGAGAGGATATGTCAAGCCAGTATTTCCCACAT
TGGATATATGATCAATTCGACAAGGAAAAGGAAATTGAAGTACCAGACGATGATGAAAAG
AAGATCATAAAGAAGCTCACTTTAGTTGCTTTATGGTGCATACAAATGAATCCACTCGAT
CGTCCCTCAATGACTAAAGTGGTTGAAATGATTGAAGGTGAATTACAGGCTTTGCAAACG
CCTCCTAGGCCTTCTGAATCACTGCAACCATCTCCGTTGGAATTCAATCTGAGTTCTTCA
CTAGGTTCAACTGAGTCTATGATTTTGCTTGAGAATTGTTCTGATTCTGCAAAAGTAGAT
GTAATTATTGGTTGA

Peptide Sequence

PEP ID

XP_016446266.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like isoform X2 [Nicotiana tabacum]
Sequence

MKMSGGTKFPSVLTILIFLQLSDTPFAEQNQRCAPSSCGHIKNISYPFRLKTGPKHCGDE
KYELSCQGNRTIFTIFTESLNGSLNYYVQAINYDNSTIRLVDPGIREQVVCSLPQHSITF
FTLPFQFDITKPDGSYAPLVVPITIFSCPFAMNSPAFVEITNCLNRSDASNTSSELLKGH
TYATMAKLLASDLSVGCTVNLMSMTSWTIDDANVYISILELHNALAYGFELSWFRDIYCN
KCDYFYGCEGENSSDVRCVDYSCTVYNFHFFKTSCVTQRHLLSVLARLSLLARIVLFPCI
FVFLMIELRRRHMSIFDAIESFLHSRNNFMPIRYPYSNIRKMTRNFKEKLGQGGYGSVYK
GKLQSGPNVAVKILTKPKADGQDFINEVATIGRIHHVNVVQLIGYCAERSKRALVYDFMP
NGSLDKYITSREGGTLLSWQRKSEIALGVARGIEYLHRGCDIQILHFDIKPHNILLDENF
VPKISDFGLAKLYPTDNSIVTLTAARGTIGYVAPELINRSIGPISYKADVYSFGMLLIEI
AGMKGNLAAREDMSSQYFPHWIYDQFDKEKEIEVPDDDEKKIIKKLTLVALWCIQMNPLD
RPSMTKVVEMIEGELQALQTPPRPSESLQPSPLEFNLSSSLGSTESMILLENCSDSAKVD
VIIG

Transcript Sequence

Gene sequence data has not been registered.